Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D4Q7Z3S7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 FAM220BP-201ENST00000377689 816 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SPDYE11-202ENST00000450699 704 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 TIMM8BP1-201ENST00000452384 211 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SPDYE9P-201ENST00000570642 692 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SPDYE10P-202ENST00000612005 668 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SPDYE8P-202ENST00000612377 668 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AC009093.7-201ENST00000623853 1223 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 AC009090.5-201ENST00000624886 2285 ntBASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D4Q7Z3S7 LINC02228-204ENST00000642115 2962 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AL136982.4-201ENST00000437689 1740 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AL627223.1-201ENST00000416693 442 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC015922.1-201ENST00000421102 1152 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 IGHV3-62-201ENST00000520057 340 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 DUX4L27-201ENST00000554796 1261 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 MIR4313-201ENST00000580760 101 ntBASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D4Q7Z3S7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms