Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 POM121L10P-201ENST00000436994 1285 ntBASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 AL133466.1-201ENST00000447582 150 ntBASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 AC126915.1-201ENST00000522847 1038 ntBASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
OTOP1Q7RTM1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AC008267.1-201ENST00000474858 1069 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SLED1-202ENST00000512051 380 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AP001505.2-201ENST00000616815 443 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AL513523.2-202ENST00000427283 2040 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 AC026691.1-201ENST00000602502 2017 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
OTOP1Q7RTM1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 MIR769-201ENST00000390225 118 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AC016700.1-201ENST00000429424 312 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 PHKG1P2-201ENST00000457537 863 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AC026410.3-201ENST00000514280 936 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AC145423.3-201ENST00000615987 467 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 AC132938.4-201ENST00000623835 848 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 DOC2GP-204ENST00000639052 2548 ntBASIC17.96■□□□□ 0.47
OTOP1Q7RTM1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.95■□□□□ 0.46
OTOP1Q7RTM1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
OTOP1Q7RTM1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms