Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.11■□□□□ 0.49
USP50Q70EL3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP50Q70EL3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC025271.4-201ENST00000621477 1726 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 RPS9P1-201ENST00000419943 583 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 AC097065.1-201ENST00000425737 517 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 DUX4L46-201ENST00000566845 751 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.1■□□□□ 0.49
USP50Q70EL3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.1■□□□□ 0.49
USP50Q70EL3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.1■□□□□ 0.49
USP50Q70EL3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 AC004466.1-201ENST00000599515 1080 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP50Q70EL3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
USP50Q70EL3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP50Q70EL3 OR6D1P-202ENST00000641007 5290 ntBASIC18.1■□□□□ 0.49
USP50Q70EL3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP50Q70EL3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP50Q70EL3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.09■□□□□ 0.49
USP50Q70EL3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.09■□□□□ 0.49
USP50Q70EL3 HLA-J-204ENST00000495278 958 ntBASIC18.09■□□□□ 0.49
USP50Q70EL3 AP002803.1-201ENST00000528836 498 ntBASIC18.09■□□□□ 0.49
USP50Q70EL3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.09■□□□□ 0.49
USP50Q70EL3 DUX4L47-201ENST00000566374 394 ntBASIC18.09■□□□□ 0.49
USP50Q70EL3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.09■□□□□ 0.49
USP50Q70EL3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.09■□□□□ 0.49
USP50Q70EL3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.09■□□□□ 0.49
USP50Q70EL3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 SHC1P1-201ENST00000425230 1745 ntBASIC18.09■□□□□ 0.49
USP50Q70EL3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP50Q70EL3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.08■□□□□ 0.49
USP50Q70EL3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP50Q70EL3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.08■□□□□ 0.48
USP50Q70EL3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
USP50Q70EL3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.08■□□□□ 0.48
USP50Q70EL3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms