Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 AC092127.1-201ENST00000567093 3455 ntBASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXR1Q6PIV2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 BCRP1-201ENST00000444246 691 ntBASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXR1Q6PIV2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AC005237.2-201ENST00000434368 219 ntBASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 COX20P2-201ENST00000452636 358 ntBASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AC013467.2-201ENST00000605472 835 ntBASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AL096865.1-201ENST00000606796 927 ntBASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 AL356585.2-201ENST00000625078 2396 ntBASIC16.41■□□□□ 0.22
FOXR1Q6PIV2 Z82170.1-201ENST00000625081 3192 ntBASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms