Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL009178.2-201ENST00000597278 2719 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AC006058.4-201ENST00000624016 1670 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 DFFBP1-201ENST00000433250 979 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AL353779.1-201ENST00000434793 351 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RPL13P2-201ENST00000440687 659 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AC093004.1-201ENST00000508850 424 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 SNX18-202ENST00000343017 3140 ntBASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC136604.1-201ENST00000418535 575 ntBASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC025048.6-201ENST00000634326 1161 ntBASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 SLC7A15P-201ENST00000424028 1363 ntBASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD3Q6PCD5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD3Q6PCD5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms