Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 LINC01144-201ENST00000626198 1710 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 ST20-AS1-201ENST00000560255 4223 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AC126335.2-201ENST00000623362 4637 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AC092919.2-201ENST00000623631 1645 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 GGT4P-201ENST00000623672 1708 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MIR3687-2-201ENST00000577708 61 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AL078644.1-201ENST00000609881 752 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MIR3687-1-201ENST00000614492 61 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AC091812.2-201ENST00000619081 385 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 WASH6P-202ENST00000359512 1437 ntBASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM53Q6P2H8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms