Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 AC134407.2-201ENST00000625089 1978 ntBASIC17.57■□□□□ 0.4
HS1BP3Q53T59 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HS1BP3Q53T59 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 AP001267.2-201ENST00000532619 2086 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 AC018712.1-201ENST00000455767 687 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 FGFR3P6-201ENST00000457012 610 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 RPL13AP23-201ENST00000480739 586 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 AC106730.1-201ENST00000566722 1090 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 MIR4313-201ENST00000580760 101 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 AC148477.8-201ENST00000624298 468 ntBASIC17.56■□□□□ 0.4
HS1BP3Q53T59 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
HS1BP3Q53T59 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 MIR940-201ENST00000401276 94 ntBASIC17.55■□□□□ 0.4
HS1BP3Q53T59 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 RNA5SP419-201ENST00000515908 135 ntBASIC17.55■□□□□ 0.4
HS1BP3Q53T59 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.55■□□□□ 0.4
HS1BP3Q53T59 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 INTS4P1-203ENST00000641008 3683 ntBASIC17.55■□□□□ 0.4
HS1BP3Q53T59 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.55■□□□□ 0.4
HS1BP3Q53T59 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 AC079776.2-201ENST00000641154 1609 ntBASIC17.54■□□□□ 0.4
HS1BP3Q53T59 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.54■□□□□ 0.4
HS1BP3Q53T59 MIR1233-2-201ENST00000408138 82 ntBASIC17.54■□□□□ 0.4
HS1BP3Q53T59 MIR1233-1-201ENST00000408722 82 ntBASIC17.54■□□□□ 0.4
HS1BP3Q53T59 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms