Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 RPS9P1-201ENST00000419943 583 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 AL354877.1-201ENST00000424412 413 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 PDIA3P2-201ENST00000428073 158 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 RNMTL1P1-201ENST00000454103 560 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 ALG1L13P-202ENST00000519320 584 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 RBM8B-201ENST00000555532 525 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 AL022344.2-201ENST00000568976 968 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO4Q2I0M5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.02■□□□□ -0
RSPO4Q2I0M5 AC138466.4-201ENST00000623965 852 ntBASIC15.02■□□□□ -0
RSPO4Q2I0M5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 AL138799.1-201ENST00000448213 1675 ntBASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO4Q2I0M5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 RNF216P1-203ENST00000404404 2427 ntBASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 RN7SL163P-201ENST00000583100 276 ntBASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 MIR6842-201ENST00000612539 65 ntBASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 AC004923.1-202ENST00000642106 209 ntBASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms