Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 KRT8P37-201ENST00000451609 1420 ntBASIC13.28□□□□□ -0.28
SSBP1Q04837 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
SSBP1Q04837 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.27□□□□□ -0.28
SSBP1Q04837 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.27□□□□□ -0.28
SSBP1Q04837 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP1Q04837 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP1Q04837 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SSBP1Q04837 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP1Q04837 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SSBP1Q04837 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP1Q04837 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 AC092119.3-201ENST00000612618 583 ntBASIC13.27□□□□□ -0.29
SSBP1Q04837 REXO1L6P-202ENST00000619970 1078 ntBASIC13.27□□□□□ -0.29
SSBP1Q04837 AC008735.5-201ENST00000623544 497 ntBASIC13.27□□□□□ -0.29
SSBP1Q04837 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SSBP1Q04837 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SSBP1Q04837 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP1Q04837 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP1Q04837 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 AC015802.1-201ENST00000588104 1449 ntBASIC13.27□□□□□ -0.29
SSBP1Q04837 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP1Q04837 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP1Q04837 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP1Q04837 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP1Q04837 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 AL928921.2-201ENST00000641325 2442 ntBASIC13.27□□□□□ -0.29
SSBP1Q04837 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP1Q04837 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AC152010.1-201ENST00000415779 2006 ntBASIC13.26□□□□□ -0.29
SSBP1Q04837 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP1Q04837 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms