Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTA1P68133 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTA1P68133 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTA1P68133 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 AJ011931.1-201ENST00000618749 2492 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 AL136982.4-201ENST00000437689 1740 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 AC138969.2-201ENST00000532739 9932 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 FOXO1B-201ENST00000504678 1527 ntBASIC14□□□□□ -0.17
ACTA1P68133 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 AC074386.1-202ENST00000463561 864 ntBASIC14□□□□□ -0.17
ACTA1P68133 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 PDPK2P-202ENST00000562415 1191 ntBASIC14□□□□□ -0.17
ACTA1P68133 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14□□□□□ -0.17
ACTA1P68133 AC064836.3-201ENST00000607928 673 ntBASIC14□□□□□ -0.17
ACTA1P68133 AC008267.7-201ENST00000624570 1194 ntBASIC14□□□□□ -0.17
ACTA1P68133 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ACTA1P68133 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ACTA1P68133 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ACTA1P68133 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.99□□□□□ -0.17
ACTA1P68133 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.99□□□□□ -0.17
ACTA1P68133 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ACTA1P68133 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ACTA1P68133 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.99□□□□□ -0.17
ACTA1P68133 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ACTA1P68133 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ACTA1P68133 HLA-H-201ENST00000383620 1096 ntBASIC13.99□□□□□ -0.17
ACTA1P68133 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.99□□□□□ -0.17
ACTA1P68133 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.99□□□□□ -0.17
ACTA1P68133 FDX1P1-201ENST00000449115 551 ntBASIC13.99□□□□□ -0.17
ACTA1P68133 RNA5SP419-201ENST00000515908 135 ntBASIC13.99□□□□□ -0.17
ACTA1P68133 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ACTA1P68133 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms