Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HMGCS2P54868 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.89■□□□□ 0.45
HMGCS2P54868 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.89■□□□□ 0.45
HMGCS2P54868 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.89■□□□□ 0.45
HMGCS2P54868 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCS2P54868 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCS2P54868 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC007787.1-201ENST00000588095 1583 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 AL139094.1-201ENST00000405549 1188 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 FNTAP2-201ENST00000430308 634 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC091804.1-201ENST00000486888 567 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 SCARNA20.5-201ENST00000516991 142 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCS2P54868 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCS2P54868 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.88■□□□□ 0.45
HMGCS2P54868 ENPP7P14-201ENST00000621765 1040 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 AL023775.1-201ENST00000454907 1746 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HMGCS2P54868 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 AC138028.6-201ENST00000616106 1482 ntBASIC17.88■□□□□ 0.45
HMGCS2P54868 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCS2P54868 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCS2P54868 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCS2P54868 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCS2P54868 AL158070.2-201ENST00000623713 1621 ntBASIC17.87■□□□□ 0.45
HMGCS2P54868 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGCS2P54868 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
HMGCS2P54868 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HMGCS2P54868 MIR663B-201ENST00000408361 115 ntBASIC17.87■□□□□ 0.45
HMGCS2P54868 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCS2P54868 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.87■□□□□ 0.45
HMGCS2P54868 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.87■□□□□ 0.45
HMGCS2P54868 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.87■□□□□ 0.45
HMGCS2P54868 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCS2P54868 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCS2P54868 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCS2P54868 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCS2P54868 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms