Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.81■□□□□ 0.28
PSEN1P49768 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PSEN1P49768 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
PSEN1P49768 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.81■□□□□ 0.28
PSEN1P49768 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.81■□□□□ 0.28
PSEN1P49768 EEF1DP4-201ENST00000446006 880 ntBASIC16.81■□□□□ 0.28
PSEN1P49768 TSPY16P-201ENST00000449843 468 ntBASIC16.81■□□□□ 0.28
PSEN1P49768 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.81■□□□□ 0.28
PSEN1P49768 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.81■□□□□ 0.28
PSEN1P49768 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PSEN1P49768 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PSEN1P49768 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSEN1P49768 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PSEN1P49768 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PSEN1P49768 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.8■□□□□ 0.28
PSEN1P49768 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.8■□□□□ 0.28
PSEN1P49768 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.8■□□□□ 0.28
PSEN1P49768 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 MTND2P3-201ENST00000452458 470 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC022784.5-201ENST00000522241 437 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.8■□□□□ 0.28
PSEN1P49768 LINC01922-201ENST00000562582 719 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 MTND1P8-201ENST00000571424 950 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.8■□□□□ 0.28
PSEN1P49768 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 AL590396.2-201ENST00000636511 1041 ntBASIC16.8■□□□□ 0.28
PSEN1P49768 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.8■□□□□ 0.28
PSEN1P49768 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSEN1P49768 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
PSEN1P49768 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PSEN1P49768 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
PSEN1P49768 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.79■□□□□ 0.28
PSEN1P49768 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PSEN1P49768 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PSEN1P49768 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSEN1P49768 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms