Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 AC136621.1-201ENST00000624017 2304 ntBASIC14.29□□□□□ -0.12
CENPAP49450 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 AL355306.1-201ENST00000415580 579 ntBASIC14.29□□□□□ -0.12
CENPAP49450 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.29□□□□□ -0.12
CENPAP49450 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.29□□□□□ -0.12
CENPAP49450 TIMM8BP1-201ENST00000452384 211 ntBASIC14.29□□□□□ -0.12
CENPAP49450 FAM86C2P-203ENST00000528684 1004 ntBASIC14.29□□□□□ -0.12
CENPAP49450 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.29□□□□□ -0.12
CENPAP49450 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 AC092127.1-201ENST00000567093 3455 ntBASIC14.29□□□□□ -0.12
CENPAP49450 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.29□□□□□ -0.12
CENPAP49450 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CENPAP49450 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CENPAP49450 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CENPAP49450 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.28□□□□□ -0.12
CENPAP49450 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.28□□□□□ -0.12
CENPAP49450 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.28□□□□□ -0.12
CENPAP49450 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.28□□□□□ -0.12
CENPAP49450 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.28□□□□□ -0.12
CENPAP49450 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 UXT-AS1-201ENST00000590504 1525 ntBASIC14.28□□□□□ -0.12
CENPAP49450 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.28□□□□□ -0.12
CENPAP49450 AC087481.3-201ENST00000602886 1894 ntBASIC14.28□□□□□ -0.12
CENPAP49450 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CENPAP49450 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CENPAP49450 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms