Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEDD4P46934 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.35■□□□□ 0.53
NEDD4P46934 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.35■□□□□ 0.53
NEDD4P46934 RN7SL692P-201ENST00000464677 288 ntBASIC18.35■□□□□ 0.53
NEDD4P46934 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NEDD4P46934 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 AL359711.2-201ENST00000563105 872 ntBASIC18.35■□□□□ 0.53
NEDD4P46934 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.35■□□□□ 0.53
NEDD4P46934 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.35■□□□□ 0.53
NEDD4P46934 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NEDD4P46934 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEDD4P46934 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NEDD4P46934 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NEDD4P46934 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 AL442647.2-201ENST00000429864 857 ntBASIC18.34■□□□□ 0.53
NEDD4P46934 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.34■□□□□ 0.53
NEDD4P46934 AC104596.2-201ENST00000512793 793 ntBASIC18.34■□□□□ 0.53
NEDD4P46934 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.34■□□□□ 0.53
NEDD4P46934 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.34■□□□□ 0.53
NEDD4P46934 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NEDD4P46934 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 CICP11-201ENST00000434745 2827 ntBASIC18.34■□□□□ 0.53
NEDD4P46934 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.34■□□□□ 0.53
NEDD4P46934 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NEDD4P46934 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEDD4P46934 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.34■□□□□ 0.53
NEDD4P46934 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.33■□□□□ 0.53
NEDD4P46934 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.33■□□□□ 0.53
NEDD4P46934 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
NEDD4P46934 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
NEDD4P46934 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NEDD4P46934 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.33■□□□□ 0.53
NEDD4P46934 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.33■□□□□ 0.53
NEDD4P46934 AC026410.3-201ENST00000514280 936 ntBASIC18.33■□□□□ 0.53
NEDD4P46934 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.33■□□□□ 0.53
NEDD4P46934 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.33■□□□□ 0.53
NEDD4P46934 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.33■□□□□ 0.53
NEDD4P46934 AL596325.1-201ENST00000563991 1082 ntBASIC18.33■□□□□ 0.53
NEDD4P46934 AC120045.2-201ENST00000567334 178 ntBASIC18.33■□□□□ 0.53
NEDD4P46934 RPSAP52-203ENST00000622976 1023 ntBASIC18.33■□□□□ 0.53
NEDD4P46934 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.33■□□□□ 0.53
NEDD4P46934 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NEDD4P46934 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NEDD4P46934 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NEDD4P46934 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.33■□□□□ 0.52
NEDD4P46934 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.33■□□□□ 0.52
NEDD4P46934 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NEDD4P46934 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NEDD4P46934 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.33■□□□□ 0.52
NEDD4P46934 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.33■□□□□ 0.52
NEDD4P46934 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms