Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
APOBEC1P41238 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.16□□□□□ -0.14
APOBEC1P41238 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.16□□□□□ -0.14
APOBEC1P41238 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
APOBEC1P41238 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.16□□□□□ -0.14
APOBEC1P41238 SRD5A3P1-201ENST00000603021 949 ntBASIC14.16□□□□□ -0.14
APOBEC1P41238 AC004840.1-201ENST00000636359 365 ntBASIC14.16□□□□□ -0.14
APOBEC1P41238 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 AC084364.1-201ENST00000551967 1556 ntBASIC14.16□□□□□ -0.14
APOBEC1P41238 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.16□□□□□ -0.14
APOBEC1P41238 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOBEC1P41238 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.16□□□□□ -0.14
APOBEC1P41238 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOBEC1P41238 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOBEC1P41238 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOBEC1P41238 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
APOBEC1P41238 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.15□□□□□ -0.14
APOBEC1P41238 MRPS18AP1-201ENST00000414458 589 ntBASIC14.15□□□□□ -0.14
APOBEC1P41238 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.15□□□□□ -0.14
APOBEC1P41238 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.15□□□□□ -0.14
APOBEC1P41238 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.15□□□□□ -0.14
APOBEC1P41238 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.15□□□□□ -0.14
APOBEC1P41238 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.15□□□□□ -0.14
APOBEC1P41238 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 AC092384.3-202ENST00000564646 2873 ntBASIC14.15□□□□□ -0.14
APOBEC1P41238 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.15□□□□□ -0.14
APOBEC1P41238 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOBEC1P41238 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.15□□□□□ -0.15
APOBEC1P41238 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms