Protein–RNA interactions for Protein: P31941

APOBEC3A, DNA dC->dU-editing enzyme APOBEC-3A, humanhuman

Predicted RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP31941 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC3AP31941 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC3AP31941 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AC005229.1-201ENST00000392885 409 ntBASIC13.33□□□□□ -0.28
APOBEC3AP31941 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AC068587.3-201ENST00000526613 355 ntBASIC13.33□□□□□ -0.28
APOBEC3AP31941 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 RPSAP52-203ENST00000622976 1023 ntBASIC13.33□□□□□ -0.28
APOBEC3AP31941 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC3AP31941 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC3AP31941 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ACKR1-201ENST00000368121 1240 ntBASIC13.32□□□□□ -0.28
APOBEC3AP31941 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 MIR1909-201ENST00000411312 80 ntBASIC13.32□□□□□ -0.28
APOBEC3AP31941 BAATP1-201ENST00000412284 1225 ntBASIC13.32□□□□□ -0.28
APOBEC3AP31941 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AC104989.1-201ENST00000519711 778 ntBASIC13.32□□□□□ -0.28
APOBEC3AP31941 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AC133552.6-201ENST00000613406 534 ntBASIC13.32□□□□□ -0.28
APOBEC3AP31941 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC3AP31941 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC3AP31941 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms