Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNA3P22001 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNA3P22001 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KCNA3P22001 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KCNA3P22001 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.85■□□□□ 0.61
KCNA3P22001 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
KCNA3P22001 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.85■□□□□ 0.61
KCNA3P22001 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.85■□□□□ 0.61
KCNA3P22001 AC004066.1-201ENST00000502488 802 ntBASIC18.85■□□□□ 0.61
KCNA3P22001 MESTP3-201ENST00000503460 968 ntBASIC18.85■□□□□ 0.61
KCNA3P22001 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.85■□□□□ 0.61
KCNA3P22001 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KCNA3P22001 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.85■□□□□ 0.61
KCNA3P22001 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
KCNA3P22001 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.85■□□□□ 0.61
KCNA3P22001 AL358472.3-201ENST00000608147 415 ntBASIC18.85■□□□□ 0.61
KCNA3P22001 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.85■□□□□ 0.61
KCNA3P22001 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.85■□□□□ 0.61
KCNA3P22001 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KCNA3P22001 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.85■□□□□ 0.61
KCNA3P22001 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KCNA3P22001 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCNA3P22001 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 AC012313.1-201ENST00000593393 3059 ntBASIC18.84■□□□□ 0.61
KCNA3P22001 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.84■□□□□ 0.61
KCNA3P22001 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
KCNA3P22001 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.84■□□□□ 0.61
KCNA3P22001 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.84■□□□□ 0.61
KCNA3P22001 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.84■□□□□ 0.61
KCNA3P22001 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 RPL18P13-201ENST00000478088 569 ntBASIC18.84■□□□□ 0.61
KCNA3P22001 AC022616.1-201ENST00000518688 554 ntBASIC18.84■□□□□ 0.61
KCNA3P22001 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
KCNA3P22001 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCNA3P22001 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KCNA3P22001 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.84■□□□□ 0.61
KCNA3P22001 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.83■□□□□ 0.61
KCNA3P22001 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
KCNA3P22001 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.83■□□□□ 0.61
KCNA3P22001 AC018695.7-201ENST00000624587 2492 ntBASIC18.83■□□□□ 0.61
KCNA3P22001 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.83■□□□□ 0.61
KCNA3P22001 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
KCNA3P22001 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
KCNA3P22001 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.83■□□□□ 0.6
KCNA3P22001 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.83■□□□□ 0.6
KCNA3P22001 GHSR-202ENST00000427970 912 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.83■□□□□ 0.6
KCNA3P22001 DNM1P30-201ENST00000563586 452 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 AC141586.1-203ENST00000567242 366 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.83■□□□□ 0.6
KCNA3P22001 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.83■□□□□ 0.6
KCNA3P22001 AC138894.2-201ENST00000602838 371 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 AL132994.2-201ENST00000603120 687 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
KCNA3P22001 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 AC051619.9-201ENST00000623237 597 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms