Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BCKDHBP21953 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 AC079328.2-201ENST00000561241 3354 ntBASIC15.34■□□□□ 0.05
BCKDHBP21953 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
BCKDHBP21953 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.34■□□□□ 0.05
BCKDHBP21953 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.34■□□□□ 0.05
BCKDHBP21953 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.34■□□□□ 0.05
BCKDHBP21953 AC126915.1-201ENST00000522847 1038 ntBASIC15.34■□□□□ 0.05
BCKDHBP21953 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.34■□□□□ 0.05
BCKDHBP21953 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 NDUFV2P1-201ENST00000596415 907 ntBASIC15.34■□□□□ 0.05
BCKDHBP21953 AC025181.2-201ENST00000606994 802 ntBASIC15.34■□□□□ 0.05
BCKDHBP21953 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
BCKDHBP21953 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.34■□□□□ 0.05
BCKDHBP21953 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 OR6D1P-203ENST00000641209 4860 ntBASIC15.34■□□□□ 0.05
BCKDHBP21953 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.34■□□□□ 0.05
BCKDHBP21953 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
BCKDHBP21953 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BCKDHBP21953 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BCKDHBP21953 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
BCKDHBP21953 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDHBP21953 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDHBP21953 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDHBP21953 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDHBP21953 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BCKDHBP21953 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 AC091046.1-201ENST00000331871 207 ntBASIC15.33■□□□□ 0.04
BCKDHBP21953 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDHBP21953 NUS1P3-201ENST00000423502 862 ntBASIC15.33■□□□□ 0.04
BCKDHBP21953 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.33■□□□□ 0.04
BCKDHBP21953 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.33■□□□□ 0.04
BCKDHBP21953 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.33■□□□□ 0.04
BCKDHBP21953 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.33■□□□□ 0.04
BCKDHBP21953 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDHBP21953 AC138627.1-207ENST00000641560 1006 ntBASIC15.33■□□□□ 0.04
BCKDHBP21953 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDHBP21953 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BCKDHBP21953 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BCKDHBP21953 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDHBP21953 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDHBP21953 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDHBP21953 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms