Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AC007274.1-201ENST00000439805 662 ntBASIC17.31■□□□□ 0.36
ATP4AP20648 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP4AP20648 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP4AP20648 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP4AP20648 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP4AP20648 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.31■□□□□ 0.36
ATP4AP20648 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 AC093813.1-201ENST00000605066 256 ntBASIC17.31■□□□□ 0.36
ATP4AP20648 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP4AP20648 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 PRAL-201ENST00000624952 3286 ntBASIC17.31■□□□□ 0.36
ATP4AP20648 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ATP4AP20648 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP4AP20648 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP4AP20648 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP4AP20648 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ATP4AP20648 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 MIR658-201ENST00000385210 100 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 BCRP2-202ENST00000447763 634 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 BCRP6-201ENST00000510112 632 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 BCRP7-201ENST00000511549 544 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 AC068587.3-201ENST00000526613 355 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ATP4AP20648 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP4AP20648 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP4AP20648 AP001063.1-201ENST00000568332 529 ntBASIC17.3■□□□□ 0.36
ATP4AP20648 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP4AP20648 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP4AP20648 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP4AP20648 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP4AP20648 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 AC092933.1-201ENST00000393644 945 ntBASIC17.29■□□□□ 0.36
ATP4AP20648 BAATP1-201ENST00000412284 1225 ntBASIC17.29■□□□□ 0.36
ATP4AP20648 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP4AP20648 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP4AP20648 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 PTP4A1P2-201ENST00000546033 454 ntBASIC17.29■□□□□ 0.36
ATP4AP20648 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP4AP20648 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP4AP20648 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP4AP20648 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.29■□□□□ 0.36
ATP4AP20648 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP4AP20648 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP4AP20648 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms