Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC126177.1-201ENST00000547829 2218 ntBASIC15.82■□□□□ 0.12
HLA-DPA1P20036 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 BASP1P1-201ENST00000430708 665 ntBASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC104640.1-201ENST00000562617 2109 ntBASIC15.82■□□□□ 0.12
HLA-DPA1P20036 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPA1P20036 AC073347.1-201ENST00000421633 2643 ntBASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 TOMM22P5-201ENST00000416399 439 ntBASIC15.81■□□□□ 0.12
HLA-DPA1P20036 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 AC114501.2-201ENST00000439631 535 ntBASIC15.81■□□□□ 0.12
HLA-DPA1P20036 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 AC004890.2-204ENST00000481968 304 ntBASIC15.81■□□□□ 0.12
HLA-DPA1P20036 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 AL390955.2-201ENST00000603032 514 ntBASIC15.81■□□□□ 0.12
HLA-DPA1P20036 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPA1P20036 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms