Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
VCLP18206 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VCLP18206 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VCLP18206 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 AC092580.3-201ENST00000430932 139 ntBASIC15.81■□□□□ 0.12
VCLP18206 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 HMGN1P19-201ENST00000436976 333 ntBASIC15.81■□□□□ 0.12
VCLP18206 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.81■□□□□ 0.12
VCLP18206 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.81■□□□□ 0.12
VCLP18206 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.81■□□□□ 0.12
VCLP18206 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCLP18206 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 AC100757.3-201ENST00000622361 1406 ntBASIC15.81■□□□□ 0.12
VCLP18206 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCLP18206 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.81■□□□□ 0.12
VCLP18206 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 KRT8P12-202ENST00000472924 1397 ntBASIC15.8■□□□□ 0.12
VCLP18206 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 SPDYE17-201ENST00000412399 783 ntBASIC15.8■□□□□ 0.12
VCLP18206 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 TEX28P1-201ENST00000613479 1221 ntBASIC15.8■□□□□ 0.12
VCLP18206 TEX28P2-201ENST00000617764 1221 ntBASIC15.8■□□□□ 0.12
VCLP18206 MIR6069-201ENST00000620069 79 ntBASIC15.8■□□□□ 0.12
VCLP18206 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.8■□□□□ 0.12
VCLP18206 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 AC006486.2-201ENST00000624246 2199 ntBASIC15.8■□□□□ 0.12
VCLP18206 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 AC011477.6-201ENST00000604980 1927 ntBASIC15.8■□□□□ 0.12
VCLP18206 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VCLP18206 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCLP18206 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
VCLP18206 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms