Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 AC127383.1-201ENST00000444697 1800 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 SLC25A24P2-201ENST00000415059 510 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.22■□□□□ 0.35
SMPD1P17405 FNTAP2-201ENST00000430308 634 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 HSPB1P2-201ENST00000448722 546 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SMPD1P17405 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 AL021578.1-201ENST00000613646 709 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.22■□□□□ 0.35
SMPD1P17405 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMPD1P17405 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 AC138028.6-201ENST00000616106 1482 ntBASIC17.21■□□□□ 0.35
SMPD1P17405 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SMPD1P17405 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.21■□□□□ 0.35
SMPD1P17405 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.21■□□□□ 0.35
SMPD1P17405 AC091804.1-201ENST00000486888 567 ntBASIC17.21■□□□□ 0.35
SMPD1P17405 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.21■□□□□ 0.35
SMPD1P17405 RHOQP1-201ENST00000555758 579 ntBASIC17.21■□□□□ 0.35
SMPD1P17405 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.21■□□□□ 0.35
SMPD1P17405 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.21■□□□□ 0.35
SMPD1P17405 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.21■□□□□ 0.35
SMPD1P17405 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMPD1P17405 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMPD1P17405 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMPD1P17405 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMPD1P17405 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.21■□□□□ 0.34
SMPD1P17405 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SMPD1P17405 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.2■□□□□ 0.34
SMPD1P17405 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
SMPD1P17405 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 AL603832.2-201ENST00000566195 2125 ntBASIC17.2■□□□□ 0.34
SMPD1P17405 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMPD1P17405 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.2■□□□□ 0.34
SMPD1P17405 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMPD1P17405 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.2■□□□□ 0.34
SMPD1P17405 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMPD1P17405 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.2■□□□□ 0.34
SMPD1P17405 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.2■□□□□ 0.34
SMPD1P17405 FAM8A4P-201ENST00000435433 1213 ntBASIC17.2■□□□□ 0.34
SMPD1P17405 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms