Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SLC9A7P1-202ENST00000556476 2239 ntBASIC26.69■■□□□ 1.86
TOP2AP11388 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TOP2AP11388 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
TOP2AP11388 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC26.68■■□□□ 1.86
TOP2AP11388 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC26.68■■□□□ 1.86
TOP2AP11388 AC008267.1-201ENST00000474858 1069 ntBASIC26.68■■□□□ 1.86
TOP2AP11388 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TOP2AP11388 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC26.68■■□□□ 1.86
TOP2AP11388 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
TOP2AP11388 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC26.67■■□□□ 1.86
TOP2AP11388 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC26.67■■□□□ 1.86
TOP2AP11388 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC26.67■■□□□ 1.86
TOP2AP11388 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC26.67■■□□□ 1.86
TOP2AP11388 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC26.67■■□□□ 1.86
TOP2AP11388 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
TOP2AP11388 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TOP2AP11388 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC26.66■■□□□ 1.86
TOP2AP11388 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC26.66■■□□□ 1.86
TOP2AP11388 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TOP2AP11388 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 Z97180.1-201ENST00000445173 988 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 AC073150.1-201ENST00000450406 1084 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TOP2AP11388 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC26.66■■□□□ 1.86
TOP2AP11388 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 SNORD3B-2-202ENST00000571722 791 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC26.66■■□□□ 1.86
TOP2AP11388 CENPX-208ENST00000584347 799 ntTSL 2 BASIC26.66■■□□□ 1.86
TOP2AP11388 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 AC006480.2-201ENST00000609770 1337 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 FAM90A7P-201ENST00000382628 1395 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 FAM90A23P-201ENST00000400136 1395 ntBASIC26.66■■□□□ 1.86
TOP2AP11388 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 STK33-217ENST00000534493 1895 ntTSL 2 BASIC26.66■■□□□ 1.86
TOP2AP11388 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC26.66■■□□□ 1.86
TOP2AP11388 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TOP2AP11388 SERF2-209ENST00000409646 559 ntTSL 4 BASIC26.65■■□□□ 1.86
TOP2AP11388 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC26.65■■□□□ 1.86
TOP2AP11388 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC26.65■■□□□ 1.86
TOP2AP11388 KLF2P1-201ENST00000447438 1042 ntBASIC26.65■■□□□ 1.86
TOP2AP11388 AL353637.1-201ENST00000451571 732 ntBASIC26.65■■□□□ 1.86
TOP2AP11388 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC26.65■■□□□ 1.86
TOP2AP11388 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC26.65■■□□□ 1.86
TOP2AP11388 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
TOP2AP11388 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC26.65■■□□□ 1.86
TOP2AP11388 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TOP2AP11388 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC26.65■■□□□ 1.86
TOP2AP11388 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TOP2AP11388 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC26.65■■□□□ 1.86
TOP2AP11388 AC104073.2-201ENST00000453737 312 ntBASIC26.65■■□□□ 1.86
TOP2AP11388 IQSEC3P1-201ENST00000538799 536 ntBASIC26.65■■□□□ 1.86
TOP2AP11388 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
TOP2AP11388 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TOP2AP11388 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
TOP2AP11388 AC244394.1-201ENST00000435000 1665 ntBASIC26.64■■□□□ 1.86
TOP2AP11388 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC26.64■■□□□ 1.86
TOP2AP11388 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TOP2AP11388 SUPT20HL2-201ENST00000486479 2409 ntBASIC26.64■■□□□ 1.85
TOP2AP11388 AL008718.2-201ENST00000609206 1313 ntBASIC26.64■■□□□ 1.85
TOP2AP11388 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TOP2AP11388 AC019193.1-201ENST00000506678 823 ntBASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms