Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 BRI3BPP1-201ENST00000594224 787 ntBASIC12.27□□□□□ -0.45
CD28P10747 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 COX11-210ENST00000639671 696 ntBASIC12.27□□□□□ -0.45
CD28P10747 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CD28P10747 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
CD28P10747 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.27□□□□□ -0.45
CD28P10747 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.27□□□□□ -0.45
CD28P10747 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CD28P10747 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CD28P10747 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.26□□□□□ -0.45
CD28P10747 AC119751.2-201ENST00000504529 210 ntBASIC12.26□□□□□ -0.45
CD28P10747 AC104989.1-201ENST00000519711 778 ntBASIC12.26□□□□□ -0.45
CD28P10747 HNRNPUP1-201ENST00000554987 333 ntBASIC12.26□□□□□ -0.45
CD28P10747 AP005482.1-201ENST00000563722 1273 ntBASIC12.26□□□□□ -0.45
CD28P10747 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 MIR5189-201ENST00000577370 114 ntBASIC12.26□□□□□ -0.45
CD28P10747 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.26□□□□□ -0.45
CD28P10747 AC233724.13-201ENST00000598383 410 ntBASIC12.26□□□□□ -0.45
CD28P10747 AL049840.4-201ENST00000602422 811 ntBASIC12.26□□□□□ -0.45
CD28P10747 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 AL607033.1-201ENST00000623900 1599 ntBASIC12.26□□□□□ -0.45
CD28P10747 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.26□□□□□ -0.45
CD28P10747 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD28P10747 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD28P10747 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms