Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HOXC6P09630 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC6P09630 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC6P09630 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HOXC6P09630 AC079328.1-201ENST00000560358 952 ntBASIC17.51■□□□□ 0.39
HOXC6P09630 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC6P09630 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC6P09630 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 AC025181.2-201ENST00000606994 802 ntBASIC17.51■□□□□ 0.39
HOXC6P09630 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXC6P09630 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXC6P09630 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXC6P09630 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC6P09630 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HOXC6P09630 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC6P09630 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC6P09630 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC6P09630 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 AL645937.2-201ENST00000396808 931 ntBASIC17.5■□□□□ 0.39
HOXC6P09630 AC079178.1-201ENST00000420915 656 ntBASIC17.5■□□□□ 0.39
HOXC6P09630 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC6P09630 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.5■□□□□ 0.39
HOXC6P09630 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC6P09630 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.5■□□□□ 0.39
HOXC6P09630 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC6P09630 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 AC016629.1-201ENST00000596579 586 ntBASIC17.5■□□□□ 0.39
HOXC6P09630 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 ENPP7P14-201ENST00000621765 1040 ntBASIC17.5■□□□□ 0.39
HOXC6P09630 AC138627.1-207ENST00000641560 1006 ntBASIC17.5■□□□□ 0.39
HOXC6P09630 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HOXC6P09630 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC6P09630 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC6P09630 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms