Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CTSDP07339 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CTSDP07339 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CTSDP07339 IGLL3P-201ENST00000412472 434 ntBASIC13.05□□□□□ -0.32
CTSDP07339 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.05□□□□□ -0.32
CTSDP07339 FAAHP1-202ENST00000446499 1238 ntBASIC13.05□□□□□ -0.32
CTSDP07339 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.05□□□□□ -0.32
CTSDP07339 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 AC096734.2-201ENST00000562054 433 ntBASIC13.05□□□□□ -0.32
CTSDP07339 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.05□□□□□ -0.32
CTSDP07339 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CTSDP07339 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CTSDP07339 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.05□□□□□ -0.32
CTSDP07339 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CTSDP07339 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 AC104581.4-201ENST00000623126 3052 ntBASIC13.04□□□□□ -0.32
CTSDP07339 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CTSDP07339 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.04□□□□□ -0.32
CTSDP07339 TPM4P1-201ENST00000436100 807 ntBASIC13.04□□□□□ -0.32
CTSDP07339 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 RHOQP3-201ENST00000437982 621 ntBASIC13.04□□□□□ -0.32
CTSDP07339 HNRNPDP1-201ENST00000439535 754 ntBASIC13.04□□□□□ -0.32
CTSDP07339 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 AC079781.3-201ENST00000449110 356 ntBASIC13.04□□□□□ -0.32
CTSDP07339 AC018712.1-201ENST00000455767 687 ntBASIC13.04□□□□□ -0.32
CTSDP07339 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms