Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 AC243562.2-201ENST00000561247 970 ntBASIC17.63■□□□□ 0.41
TPM3P06753 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM3P06753 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM3P06753 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 AC005252.3-201ENST00000623855 2258 ntBASIC17.63■□□□□ 0.41
TPM3P06753 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TPM3P06753 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TPM3P06753 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 ST20-AS1-201ENST00000560255 4223 ntBASIC17.62■□□□□ 0.41
TPM3P06753 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TPM3P06753 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 AF186996.4-201ENST00000467186 377 ntBASIC17.62■□□□□ 0.41
TPM3P06753 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.62■□□□□ 0.41
TPM3P06753 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.62■□□□□ 0.41
TPM3P06753 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM3P06753 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM3P06753 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM3P06753 CICP14-201ENST00000629111 2732 ntBASIC17.62■□□□□ 0.41
TPM3P06753 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM3P06753 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TPM3P06753 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TPM3P06753 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.61■□□□□ 0.41
TPM3P06753 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.61■□□□□ 0.41
TPM3P06753 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 AC092474.2-201ENST00000424288 719 ntBASIC17.61■□□□□ 0.41
TPM3P06753 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.61■□□□□ 0.41
TPM3P06753 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.61■□□□□ 0.41
TPM3P06753 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.61■□□□□ 0.41
TPM3P06753 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 TP73-AS1-207ENST00000624167 988 ntBASIC17.61■□□□□ 0.41
TPM3P06753 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.61■□□□□ 0.41
TPM3P06753 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.61■□□□□ 0.41
TPM3P06753 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.61■□□□□ 0.41
TPM3P06753 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TPM3P06753 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms