Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.4■□□□□ 0.22
RB1P06400 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.4■□□□□ 0.22
RB1P06400 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 AC004066.1-201ENST00000502488 802 ntBASIC16.4■□□□□ 0.22
RB1P06400 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.4■□□□□ 0.22
RB1P06400 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.4■□□□□ 0.22
RB1P06400 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RB1P06400 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.4■□□□□ 0.22
RB1P06400 PPY2P-201ENST00000582808 702 ntBASIC16.4■□□□□ 0.22
RB1P06400 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.4■□□□□ 0.22
RB1P06400 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.4■□□□□ 0.22
RB1P06400 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RB1P06400 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RB1P06400 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RB1P06400 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.22
RB1P06400 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
RB1P06400 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.39■□□□□ 0.21
RB1P06400 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RB1P06400 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
RB1P06400 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 RPS2P36-201ENST00000456516 831 ntBASIC16.39■□□□□ 0.21
RB1P06400 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 AL603764.1-201ENST00000636452 321 ntBASIC16.39■□□□□ 0.21
RB1P06400 AC128714.1-201ENST00000637035 887 ntBASIC16.39■□□□□ 0.21
RB1P06400 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RB1P06400 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RB1P06400 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
RB1P06400 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RB1P06400 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.38■□□□□ 0.21
RB1P06400 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 KRT8P14-201ENST00000414254 1442 ntBASIC16.38■□□□□ 0.21
RB1P06400 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RB1P06400 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.38■□□□□ 0.21
RB1P06400 AC253536.4-201ENST00000440539 267 ntBASIC16.38■□□□□ 0.21
RB1P06400 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 Z97180.1-201ENST00000445173 988 ntBASIC16.38■□□□□ 0.21
RB1P06400 SPTLC1P5-201ENST00000450718 252 ntBASIC16.38■□□□□ 0.21
RB1P06400 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.38■□□□□ 0.21
RB1P06400 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.38■□□□□ 0.21
RB1P06400 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms