Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 CSF2RBP1-201ENST00000447905 391 ntBASIC17.06■□□□□ 0.32
VTNP04004 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
VTNP04004 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.06■□□□□ 0.32
VTNP04004 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.06■□□□□ 0.32
VTNP04004 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.06■□□□□ 0.32
VTNP04004 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.06■□□□□ 0.32
VTNP04004 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
VTNP04004 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 AL513523.2-202ENST00000427283 2040 ntBASIC17.06■□□□□ 0.32
VTNP04004 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VTNP04004 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VTNP04004 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 PCDHA1-201ENST00000378133 2726 ntBASIC17.05■□□□□ 0.32
VTNP04004 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 AC009090.5-201ENST00000624886 2285 ntBASIC17.05■□□□□ 0.32
VTNP04004 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VTNP04004 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.05■□□□□ 0.32
VTNP04004 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.05■□□□□ 0.32
VTNP04004 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 AP000812.2-201ENST00000538934 718 ntBASIC17.05■□□□□ 0.32
VTNP04004 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.05■□□□□ 0.32
VTNP04004 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.05■□□□□ 0.32
VTNP04004 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.05■□□□□ 0.32
VTNP04004 BX539320.1-201ENST00000623759 877 ntBASIC17.05■□□□□ 0.32
VTNP04004 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VTNP04004 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VTNP04004 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
VTNP04004 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms