Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC104306.2-201ENST00000451877 341 ntBASIC18.56■□□□□ 0.56
COL1A1P02452 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.56■□□□□ 0.56
COL1A1P02452 AC004066.1-201ENST00000502488 802 ntBASIC18.56■□□□□ 0.56
COL1A1P02452 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.56■□□□□ 0.56
COL1A1P02452 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.56■□□□□ 0.56
COL1A1P02452 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL1A1P02452 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.56■□□□□ 0.56
COL1A1P02452 MIR4741-201ENST00000579822 90 ntBASIC18.56■□□□□ 0.56
COL1A1P02452 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.56■□□□□ 0.56
COL1A1P02452 AC006453.4-201ENST00000636949 1252 ntBASIC18.56■□□□□ 0.56
COL1A1P02452 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL1A1P02452 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL1A1P02452 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.56■□□□□ 0.56
COL1A1P02452 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL1A1P02452 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL1A1P02452 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.56■□□□□ 0.56
COL1A1P02452 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL1A1P02452 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL1A1P02452 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 PRAL-201ENST00000624952 3286 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
COL1A1P02452 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.55■□□□□ 0.56
COL1A1P02452 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.55■□□□□ 0.56
COL1A1P02452 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.55■□□□□ 0.56
COL1A1P02452 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL1A1P02452 POM121L8P-201ENST00000417732 1281 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 POM121L9P-203ENST00000441984 1285 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.55■□□□□ 0.56
COL1A1P02452 RNA5SP486-201ENST00000515961 83 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.55■□□□□ 0.56
COL1A1P02452 AC004466.1-201ENST00000599515 1080 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 REXO1L4P-201ENST00000605109 1937 ntBASIC18.55■□□□□ 0.56
COL1A1P02452 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL1A1P02452 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL1A1P02452 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
COL1A1P02452 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.54■□□□□ 0.56
COL1A1P02452 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL1A1P02452 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.54■□□□□ 0.56
COL1A1P02452 BTBD6P1-201ENST00000412176 1267 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 SLC25A24P2-201ENST00000415059 510 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 CNN2P10-201ENST00000443067 918 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 AC114812.1-204ENST00000449669 728 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.54■□□□□ 0.56
COL1A1P02452 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 AP006547.1-201ENST00000563435 692 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 RN7SL48P-201ENST00000579283 293 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.54■□□□□ 0.56
COL1A1P02452 AHCYP2-201ENST00000430630 1300 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COL1A1P02452 CICP11-201ENST00000434745 2827 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 AL157414.3-201ENST00000624276 1954 ntBASIC18.54■□□□□ 0.56
COL1A1P02452 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL1A1P02452 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
COL1A1P02452 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.54■□□□□ 0.56
COL1A1P02452 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL1A1P02452 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.53■□□□□ 0.56
COL1A1P02452 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.53■□□□□ 0.56
COL1A1P02452 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.53■□□□□ 0.56
COL1A1P02452 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms