Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPNE6O95741 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CPNE6O95741 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE6O95741 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.41■□□□□ 0.06
CPNE6O95741 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE6O95741 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 ELK1P1-201ENST00000485699 580 ntBASIC15.41■□□□□ 0.06
CPNE6O95741 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE6O95741 RARRES2P5-201ENST00000564013 466 ntBASIC15.41■□□□□ 0.06
CPNE6O95741 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE6O95741 AL162274.1-201ENST00000617191 1098 ntBASIC15.41■□□□□ 0.06
CPNE6O95741 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE6O95741 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPNE6O95741 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE6O95741 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE6O95741 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE6O95741 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE6O95741 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 Z97205.2-201ENST00000564697 1639 ntBASIC15.4■□□□□ 0.06
CPNE6O95741 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE6O95741 AC138035.3-201ENST00000622706 2791 ntBASIC15.4■□□□□ 0.06
CPNE6O95741 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE6O95741 AC104596.2-201ENST00000512793 793 ntBASIC15.4■□□□□ 0.06
CPNE6O95741 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE6O95741 AC106886.1-201ENST00000568660 600 ntBASIC15.4■□□□□ 0.06
CPNE6O95741 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE6O95741 CTBP2P3-201ENST00000585629 1255 ntBASIC15.4■□□□□ 0.06
CPNE6O95741 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE6O95741 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE6O95741 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE6O95741 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE6O95741 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CPNE6O95741 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE6O95741 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE6O95741 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE6O95741 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE6O95741 AC007274.1-201ENST00000439805 662 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 TTTY23B-201ENST00000442790 549 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE6O95741 RN7SL837P-201ENST00000463010 287 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE6O95741 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE6O95741 HILS1-202ENST00000545329 423 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 TMEM261P1-201ENST00000604899 340 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 AC017083.2-201ENST00000608069 979 ntBASIC15.39■□□□□ 0.05
CPNE6O95741 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CPNE6O95741 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms