Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 AC002472.3-201ENST00000640124 621 ntBASIC22.91■■□□□ 1.26
RAPGEF3O95398 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF3O95398 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC22.91■■□□□ 1.26
RAPGEF3O95398 AC006449.6-201ENST00000612330 2296 ntBASIC22.91■■□□□ 1.26
RAPGEF3O95398 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 AK6-201ENST00000380818 1183 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 AC010141.1-201ENST00000411585 623 ntBASIC22.9■■□□□ 1.26
RAPGEF3O95398 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 FAU-202ENST00000434372 533 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 PFN2-206ENST00000461930 606 ntTSL 4 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 DUX4L47-201ENST00000566374 394 ntBASIC22.9■■□□□ 1.26
RAPGEF3O95398 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 CASP16P-204ENST00000635032 809 ntBASIC22.9■■□□□ 1.26
RAPGEF3O95398 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF3O95398 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC22.9■■□□□ 1.26
RAPGEF3O95398 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF3O95398 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RAPGEF3O95398 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC22.89■■□□□ 1.26
RAPGEF3O95398 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
RAPGEF3O95398 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF3O95398 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 SOD2-202ENST00000367054 815 ntTSL 2 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 HLA-K-203ENST00000430151 1046 ntBASIC22.89■■□□□ 1.25
RAPGEF3O95398 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 SCARNA21-201ENST00000517026 139 ntBASIC22.89■■□□□ 1.25
RAPGEF3O95398 ALG1L13P-202ENST00000519320 584 ntBASIC22.89■■□□□ 1.25
RAPGEF3O95398 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 RN7SL596P-201ENST00000582123 288 ntBASIC22.89■■□□□ 1.25
RAPGEF3O95398 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF3O95398 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC22.89■■□□□ 1.25
RAPGEF3O95398 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AL139008.1-201ENST00000437894 228 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC018463.1-201ENST00000456674 917 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC130709.1-201ENST00000484779 1212 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC026434.2-201ENST00000506094 1078 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC026410.1-201ENST00000507366 1101 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 SAMD11P1-201ENST00000571429 661 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AC005632.3-201ENST00000605544 308 ntBASIC22.88■■□□□ 1.25
RAPGEF3O95398 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms