Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.45■□□□□ 0.38
CLSTN1O94985 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLSTN1O94985 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLSTN1O94985 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLSTN1O94985 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.45■□□□□ 0.38
CLSTN1O94985 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLSTN1O94985 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.45■□□□□ 0.38
CLSTN1O94985 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLSTN1O94985 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.44■□□□□ 0.38
CLSTN1O94985 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.44■□□□□ 0.38
CLSTN1O94985 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.44■□□□□ 0.38
CLSTN1O94985 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLSTN1O94985 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CLSTN1O94985 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 AC010491.1-201ENST00000563101 2797 ntBASIC17.44■□□□□ 0.38
CLSTN1O94985 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.44■□□□□ 0.38
CLSTN1O94985 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 IGHV3-42-201ENST00000520410 361 ntBASIC17.44■□□□□ 0.38
CLSTN1O94985 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
CLSTN1O94985 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.44■□□□□ 0.38
CLSTN1O94985 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.44■□□□□ 0.38
CLSTN1O94985 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.44■□□□□ 0.38
CLSTN1O94985 MIR4321-201ENST00000592276 80 ntBASIC17.44■□□□□ 0.38
CLSTN1O94985 AC026979.3-201ENST00000607315 403 ntBASIC17.44■□□□□ 0.38
CLSTN1O94985 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.44■□□□□ 0.38
CLSTN1O94985 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.44■□□□□ 0.38
CLSTN1O94985 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 AP005117.1-202ENST00000581724 1908 ntBASIC17.44■□□□□ 0.38
CLSTN1O94985 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.44■□□□□ 0.38
CLSTN1O94985 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLSTN1O94985 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLSTN1O94985 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLSTN1O94985 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.43■□□□□ 0.38
CLSTN1O94985 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.43■□□□□ 0.38
CLSTN1O94985 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.43■□□□□ 0.38
CLSTN1O94985 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.43■□□□□ 0.38
CLSTN1O94985 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.43■□□□□ 0.38
CLSTN1O94985 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLSTN1O94985 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.43■□□□□ 0.38
CLSTN1O94985 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
CLSTN1O94985 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLSTN1O94985 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.43■□□□□ 0.38
CLSTN1O94985 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms