Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 LINC00528-201ENST00000600723 2160 ntBASIC17.01■□□□□ 0.31
RNF40O75150 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF40O75150 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF40O75150 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF40O75150 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF40O75150 AL138918.1-201ENST00000568306 659 ntBASIC17.01■□□□□ 0.31
RNF40O75150 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF40O75150 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF40O75150 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF40O75150 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 CICP23-201ENST00000605013 2741 ntBASIC17.01■□□□□ 0.31
RNF40O75150 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF40O75150 AP003680.1-201ENST00000598970 3660 ntBASIC17.01■□□□□ 0.31
RNF40O75150 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF40O75150 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17■□□□□ 0.31
RNF40O75150 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17■□□□□ 0.31
RNF40O75150 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF40O75150 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RNF40O75150 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17■□□□□ 0.31
RNF40O75150 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17■□□□□ 0.31
RNF40O75150 AC241585.1-201ENST00000433527 519 ntBASIC17■□□□□ 0.31
RNF40O75150 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17■□□□□ 0.31
RNF40O75150 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17■□□□□ 0.31
RNF40O75150 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF40O75150 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17■□□□□ 0.31
RNF40O75150 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF40O75150 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF40O75150 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17■□□□□ 0.31
RNF40O75150 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17■□□□□ 0.31
RNF40O75150 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17■□□□□ 0.31
RNF40O75150 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF40O75150 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF40O75150 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF40O75150 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF40O75150 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF40O75150 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF40O75150 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF40O75150 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF40O75150 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF40O75150 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF40O75150 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms