Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE3O75131 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE3O75131 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE3O75131 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CPNE3O75131 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 AZGP1P1-201ENST00000411909 902 ntBASIC15.11■□□□□ 0.01
CPNE3O75131 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE3O75131 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 GIMAP3P-201ENST00000495150 836 ntBASIC15.11■□□□□ 0.01
CPNE3O75131 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE3O75131 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE3O75131 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE3O75131 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE3O75131 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE3O75131 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE3O75131 AP001282.1-201ENST00000531301 1499 ntBASIC15.11■□□□□ 0.01
CPNE3O75131 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE3O75131 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE3O75131 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 ALOX12P2-203ENST00000570921 1945 ntBASIC15.1■□□□□ 0.01
CPNE3O75131 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CPNE3O75131 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 HAUS4P1-201ENST00000406739 1145 ntBASIC15.1■□□□□ 0.01
CPNE3O75131 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE3O75131 AC104596.2-201ENST00000512793 793 ntBASIC15.1■□□□□ 0.01
CPNE3O75131 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CPNE3O75131 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE3O75131 RARRES2P5-201ENST00000564013 466 ntBASIC15.1■□□□□ 0.01
CPNE3O75131 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPNE3O75131 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE3O75131 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.1■□□□□ 0.01
CPNE3O75131 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms