Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA1FO60840 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA1FO60840 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.33■□□□□ 0.68
CACNA1FO60840 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.33■□□□□ 0.68
CACNA1FO60840 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CACNA1FO60840 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.33■□□□□ 0.68
CACNA1FO60840 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CACNA1FO60840 C2orf69P2-201ENST00000562032 1123 ntBASIC19.33■□□□□ 0.68
CACNA1FO60840 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.33■□□□□ 0.68
CACNA1FO60840 AC023090.2-201ENST00000625182 2110 ntBASIC19.33■□□□□ 0.68
CACNA1FO60840 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.33■□□□□ 0.68
CACNA1FO60840 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1FO60840 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CACNA1FO60840 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CACNA1FO60840 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CACNA1FO60840 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CACNA1FO60840 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 AGAP7P-201ENST00000582299 2062 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 AGAP14-201ENST00000624701 2060 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 FO681548.1-201ENST00000455617 1132 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 MIR6752-201ENST00000618442 71 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 AL033527.4-201ENST00000641026 673 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AL138725.1-201ENST00000407347 1314 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CACNA1FO60840 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1FO60840 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1FO60840 AC006453.4-201ENST00000636949 1252 ntBASIC19.32■□□□□ 0.68
CACNA1FO60840 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1FO60840 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA1FO60840 LILRP1-201ENST00000444199 1370 ntBASIC19.31■□□□□ 0.68
CACNA1FO60840 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA1FO60840 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA1FO60840 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA1FO60840 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA1FO60840 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA1FO60840 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1FO60840 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA1FO60840 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA1FO60840 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA1FO60840 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1FO60840 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1FO60840 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 ENPP7P14-201ENST00000621765 1040 ntBASIC19.31■□□□□ 0.68
CACNA1FO60840 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1FO60840 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1FO60840 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA1FO60840 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms