Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GFRA3O60609 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GFRA3O60609 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.98□□□□□ -0.01
GFRA3O60609 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GFRA3O60609 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GFRA3O60609 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA3O60609 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GFRA3O60609 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 ENPP7P8-202ENST00000527856 1345 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA3O60609 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 AC092638.2-201ENST00000441105 947 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA3O60609 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.97□□□□□ -0.01
GFRA3O60609 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.97□□□□□ -0.01
GFRA3O60609 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA3O60609 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA3O60609 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA3O60609 AL139339.2-201ENST00000608063 657 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A7P-201ENST00000382628 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A23P-201ENST00000400136 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A21P-201ENST00000510875 1396 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A15P-201ENST00000514465 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A6P-201ENST00000515148 1394 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A16P-201ENST00000526662 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A9P-201ENST00000527940 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A5P-201ENST00000528738 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A14P-201ENST00000530386 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 FAM90A13P-201ENST00000534703 1395 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA3O60609 AC067852.2-201ENST00000590513 2313 ntBASIC14.97□□□□□ -0.01
GFRA3O60609 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GFRA3O60609 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GFRA3O60609 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA3O60609 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 AC092053.1-201ENST00000605787 1936 ntBASIC14.96□□□□□ -0.01
GFRA3O60609 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA3O60609 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GFRA3O60609 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
GFRA3O60609 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA3O60609 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA3O60609 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA3O60609 AC104629.1-201ENST00000494226 508 ntBASIC14.96□□□□□ -0.01
GFRA3O60609 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.96□□□□□ -0.01
GFRA3O60609 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA3O60609 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA3O60609 AC022148.2-201ENST00000586176 560 ntBASIC14.96□□□□□ -0.01
GFRA3O60609 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA3O60609 AC092068.3-201ENST00000587894 2016 ntBASIC14.96□□□□□ -0.01
GFRA3O60609 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms