Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXN1O15353 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXN1O15353 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXN1O15353 FGFR3P5-201ENST00000564496 886 ntBASIC18.65■□□□□ 0.58
FOXN1O15353 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXN1O15353 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 MIR6756-201ENST00000616240 63 ntBASIC18.65■□□□□ 0.58
FOXN1O15353 AL158212.4-201ENST00000624062 1286 ntBASIC18.65■□□□□ 0.58
FOXN1O15353 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 AC022188.1-201ENST00000620960 1664 ntBASIC18.65■□□□□ 0.58
FOXN1O15353 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXN1O15353 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FOXN1O15353 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 MTX1P1-201ENST00000440904 838 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXN1O15353 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXN1O15353 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 AC009486.1-201ENST00000569860 813 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXN1O15353 CLUHP6-201ENST00000580789 941 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 AP001505.2-201ENST00000616815 443 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 AL603832.2-201ENST00000566195 2125 ntBASIC18.64■□□□□ 0.57
FOXN1O15353 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN1O15353 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN1O15353 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FOXN1O15353 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 AC006449.6-201ENST00000612330 2296 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXN1O15353 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 CNN2P8-201ENST00000421872 913 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FOXN1O15353 RPSAP36-202ENST00000494591 1261 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
FOXN1O15353 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 AC124283.3-201ENST00000570869 594 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
FOXN1O15353 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FOXN1O15353 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 AC018735.1-201ENST00000437208 1502 ntBASIC18.63■□□□□ 0.57
FOXN1O15353 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms