Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 AC068587.6-202ENST00000641839 5619 ntBASIC15.38■□□□□ 0.05
CDC7O00311 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.38■□□□□ 0.05
CDC7O00311 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDC7O00311 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC7O00311 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 HLA-V-204ENST00000476601 1289 ntBASIC15.38■□□□□ 0.05
CDC7O00311 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.38■□□□□ 0.05
CDC7O00311 AC025048.3-201ENST00000590609 569 ntBASIC15.38■□□□□ 0.05
CDC7O00311 AC005702.4-201ENST00000618393 416 ntBASIC15.38■□□□□ 0.05
CDC7O00311 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC7O00311 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
CDC7O00311 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 AC084364.1-201ENST00000551967 1556 ntBASIC15.37■□□□□ 0.05
CDC7O00311 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.37■□□□□ 0.05
CDC7O00311 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 Z97205.2-201ENST00000564697 1639 ntBASIC15.37■□□□□ 0.05
CDC7O00311 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.37■□□□□ 0.05
CDC7O00311 CNN2P2-201ENST00000443536 909 ntBASIC15.37■□□□□ 0.05
CDC7O00311 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 CNN2P3-201ENST00000450201 906 ntBASIC15.37■□□□□ 0.05
CDC7O00311 SERBP1P3-201ENST00000459980 809 ntBASIC15.37■□□□□ 0.05
CDC7O00311 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CDC7O00311 AL512361.1-201ENST00000554200 418 ntBASIC15.37■□□□□ 0.05
CDC7O00311 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.37■□□□□ 0.05
CDC7O00311 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 TEX28P1-201ENST00000613479 1221 ntBASIC15.37■□□□□ 0.05
CDC7O00311 TEX28P2-201ENST00000617764 1221 ntBASIC15.37■□□□□ 0.05
CDC7O00311 AL136317.3-201ENST00000618497 906 ntBASIC15.37■□□□□ 0.05
CDC7O00311 AC079781.4-201ENST00000641908 219 ntBASIC15.37■□□□□ 0.05
CDC7O00311 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CDC7O00311 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 AGAP7P-201ENST00000582299 2062 ntBASIC15.37■□□□□ 0.05
CDC7O00311 AGAP14-201ENST00000624701 2060 ntBASIC15.37■□□□□ 0.05
CDC7O00311 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDC7O00311 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC7O00311 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms