Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC012441.1-201ENST00000446669 685 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 BNIP3P42-201ENST00000454982 569 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC007551.1-201ENST00000457394 519 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC015910.1-201ENST00000579400 975 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 BNIP3P29-201ENST00000598302 571 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC107373.2-201ENST00000607735 490 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 AC011447.5-201ENST00000616168 564 ntBASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 CYP2T1P-202ENST00000641596 2535 ntBASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TBC1D3FA6NER0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AC093525.8-201ENST00000624099 1342 ntBASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 ACKR1-201ENST00000368121 1240 ntBASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AC016694.1-201ENST00000434179 700 ntBASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms