Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MED15P5-201ENST00000423150 992 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 SPDYE11-202ENST00000450699 704 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 SPDYE9P-201ENST00000570642 692 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 SPDYE10P-202ENST00000612005 668 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 SPDYE8P-202ENST00000612377 668 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 FAM8A3P-201ENST00000427218 844 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 RARRES2P9-201ENST00000565168 469 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 AC106730.1-201ENST00000566722 1090 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 AC060766.1-201ENST00000590824 627 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 AC026979.3-201ENST00000607315 403 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 AC027601.4-201ENST00000611259 610 ntBASIC16.65■□□□□ 0.26
RCCD1A6NED2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCCD1A6NED2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RCCD1A6NED2 ZNF259P1-201ENST00000407656 1365 ntBASIC16.64■□□□□ 0.26
RCCD1A6NED2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 AL591424.1-201ENST00000442569 1213 ntBASIC16.64■□□□□ 0.25
RCCD1A6NED2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 KRT8P23-201ENST00000560090 1207 ntBASIC16.64■□□□□ 0.25
RCCD1A6NED2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 FAM197Y3-203ENST00000618346 717 ntBASIC16.64■□□□□ 0.25
RCCD1A6NED2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms