Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC011477.6-201ENST00000604980 1927 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 AC018695.7-201ENST00000624587 2492 ntBASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC187A0A096LP49 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 AC092506.1-202ENST00000401022 528 ntBASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 HOMER2P2-201ENST00000451621 847 ntBASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCDC187A0A096LP49 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 AC018892.3-201ENST00000623986 2499 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 AL162727.3-201ENST00000635661 2787 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ACTBP8-201ENST00000403258 1108 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 AL590640.2-201ENST00000457038 527 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms