Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 AL928921.2-201ENST00000641325 2442 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 KRT18P34-201ENST00000488218 1270 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AC243562.2-201ENST00000561247 970 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AC002347.1-201ENST00000569543 541 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AC138894.3-201ENST00000603787 634 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AL355877.3-201ENST00000622820 899 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 REXO1L1P-202ENST00000608646 1974 ntBASIC14.87□□□□□ -0.03
AP4S1Q9Y587 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
AP4S1Q9Y587 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 LAGE3P1-201ENST00000425356 484 ntBASIC14.86□□□□□ -0.03
AP4S1Q9Y587 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AC008667.4-201ENST00000607370 168 ntBASIC14.86□□□□□ -0.03
AP4S1Q9Y587 ACTL9-202ENST00000612068 1252 ntBASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms