Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 CRB3P1-201ENST00000449338 276 ntBASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 AC009407.1-201ENST00000568958 598 ntBASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 AC008738.7-201ENST00000609744 511 ntBASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 AL109936.8-201ENST00000641772 604 ntBASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.46□□□□□ -0.09
RPH3AQ9Y2J0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
RPH3AQ9Y2J0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC011477.6-201ENST00000604980 1927 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 FO393414.2-201ENST00000405153 598 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC009477.1-201ENST00000452936 217 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC135586.1-201ENST00000539323 574 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC007950.2-201ENST00000615045 2347 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AC132872.4-202ENST00000622924 2756 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms