Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 DUX4L45-201ENST00000566406 1057 ntBASIC21.21■□□□□ 0.99
NINLQ9Y2I6 SAMD11P1-201ENST00000571429 661 ntBASIC21.21■□□□□ 0.99
NINLQ9Y2I6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 AC106872.11-201ENST00000605838 421 ntBASIC21.21■□□□□ 0.99
NINLQ9Y2I6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 AL603764.1-201ENST00000636452 321 ntBASIC21.21■□□□□ 0.99
NINLQ9Y2I6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NINLQ9Y2I6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 AC007787.1-201ENST00000588095 1583 ntBASIC21.2■□□□□ 0.98
NINLQ9Y2I6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 RN7SL48P-201ENST00000579283 293 ntBASIC21.2■□□□□ 0.98
NINLQ9Y2I6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NINLQ9Y2I6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC007950.2-201ENST00000615045 2347 ntBASIC21.19■□□□□ 0.98
NINLQ9Y2I6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC006001.1-201ENST00000325130 474 ntBASIC21.19■□□□□ 0.98
NINLQ9Y2I6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 BRWD1P1-201ENST00000401091 371 ntBASIC21.19■□□□□ 0.98
NINLQ9Y2I6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 AC145423.3-201ENST00000615987 467 ntBASIC21.19■□□□□ 0.98
NINLQ9Y2I6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.19■□□□□ 0.98
NINLQ9Y2I6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NINLQ9Y2I6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms