Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 SPDYE18-201ENST00000510091 1050 ntBASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 DOC2GP-202ENST00000514950 1163 ntBASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 CHCHD2P3-201ENST00000603038 451 ntBASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
FNDC3AQ9Y2H6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 AC069224.1-201ENST00000566372 1715 ntBASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 AC018892.3-201ENST00000623986 2499 ntBASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FNDC3AQ9Y2H6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AC087499.6-201ENST00000411576 835 ntBASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AC245100.5-201ENST00000452108 331 ntBASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AC026979.3-201ENST00000607315 403 ntBASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 AL391825.1-201ENST00000457671 1364 ntBASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FNDC3AQ9Y2H6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms