Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 ARSEP1-201ENST00000420443 635 ntBASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 HILS1-202ENST00000545329 423 ntBASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA1Q9UND3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC025048.3-201ENST00000590609 569 ntBASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC005702.4-201ENST00000618393 416 ntBASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 PCDHA3-202ENST00000532566 4594 ntBASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC112504.1-201ENST00000623415 1841 ntBASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 AC132872.4-202ENST00000622924 2756 ntBASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA1Q9UND3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 PRAL-201ENST00000624952 3286 ntBASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 ELK1P1-201ENST00000485699 580 ntBASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.49□□□□□ -0.09
NPIPA1Q9UND3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms