Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 LRRC59-203ENST00000576448 1531 ntBASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 DUX4L47-201ENST00000566374 394 ntBASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ENPP7P14-201ENST00000621765 1040 ntBASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.83■□□□□ 0.44
SYNPO2Q9UMS6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPO2Q9UMS6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC090616.6-203ENST00000579186 1945 ntBASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 MIR1908-201ENST00000410394 80 ntBASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 EIF3FP3-201ENST00000434851 1086 ntBASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC245100.3-201ENST00000441281 285 ntBASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNPO2Q9UMS6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms