Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC52A1Q9NWF4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC52A1Q9NWF4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 LINC02447-202ENST00000501888 2146 ntBASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 EID1-202ENST00000560490 584 ntTSL 3 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 PRKXP1-201ENST00000561423 1122 ntBASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AF254983.2-201ENST00000612331 135 ntBASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 AC068587.8-201ENST00000641239 219 ntBASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC52A1Q9NWF4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 RNMTL1P1-201ENST00000454103 560 ntBASIC22■■□□□ 1.11
SLC52A1Q9NWF4 LDHBP1-201ENST00000455730 1119 ntBASIC22■■□□□ 1.11
SLC52A1Q9NWF4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 MIR4783-201ENST00000580343 82 ntBASIC22■■□□□ 1.11
SLC52A1Q9NWF4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 AL133499.1-201ENST00000596207 608 ntBASIC22■■□□□ 1.11
SLC52A1Q9NWF4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
SLC52A1Q9NWF4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AC007274.2-201ENST00000421675 662 ntBASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AL805961.1-203ENST00000641078 1258 ntBASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AC004899.1-201ENST00000424687 1714 ntBASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC52A1Q9NWF4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC52A1Q9NWF4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC52A1Q9NWF4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC52A1Q9NWF4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC52A1Q9NWF4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC52A1Q9NWF4 AC005332.8-201ENST00000622750 2735 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms