Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 MIR663B-201ENST00000408361 115 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 AC004898.1-201ENST00000451057 766 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 AKR7A2P1-201ENST00000460134 915 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 EEF1DP1-201ENST00000585891 896 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 AL021578.1-201ENST00000613646 709 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 AC092364.2-201ENST00000596710 2692 ntBASIC16.53■□□□□ 0.24
TLR9Q9NR96 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TLR9Q9NR96 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.53■□□□□ 0.24
TLR9Q9NR96 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC015818.8-201ENST00000587907 1519 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 CD8B2-202ENST00000417670 633 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC091804.1-201ENST00000486888 567 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AP006547.1-201ENST00000563435 692 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC104982.3-201ENST00000581995 514 ntBASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR9Q9NR96 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TLR9Q9NR96 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR9Q9NR96 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR9Q9NR96 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR9Q9NR96 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR9Q9NR96 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR9Q9NR96 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.52■□□□□ 0.23
TLR9Q9NR96 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 AC138028.6-201ENST00000616106 1482 ntBASIC16.51■□□□□ 0.23
TLR9Q9NR96 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 RPSAP36-202ENST00000494591 1261 ntBASIC16.51■□□□□ 0.23
TLR9Q9NR96 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 SCARNA20.5-201ENST00000516991 142 ntBASIC16.51■□□□□ 0.23
TLR9Q9NR96 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms